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mtDNA HAPLOGROUP changed from H27 t0 B4'5

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  • lgmayka
    replied
    The Polish Project has plenty of H27.

    Leave a comment:


  • khreed
    replied
    H27 Haplogroup

    I recently got my mtDNA full sequence results, and I cannot find anything about this haplogroup. It's not even listed in the dropdown menu on the mitosearch site. I can find little/no information and only have one match.

    Leave a comment:


  • efgen
    replied
    DMK,

    Just want to make sure you noticed that your haplogroup is now H27 again? It was fixed on Sept 12 -- I just forgot to post here when it was done.

    Elise

    Leave a comment:


  • DMK
    replied
    Originally posted by efgen View Post
    DMK,

    IT has worked on a fix for this bug, and it appears that the fix is close to being released. It *might* be released by the end of this week, but don't hold me to that -- it's just an informal estimate on my part

    Elise
    Thanks to all who responded.And Elise I want hold you to it but sure hope it happens that quick.

    Leave a comment:


  • efgen
    replied
    DMK,

    IT has worked on a fix for this bug, and it appears that the fix is close to being released. It *might* be released by the end of this week, but don't hold me to that -- it's just an informal estimate on my part

    Elise

    Leave a comment:


  • Ann Turner
    replied
    DMK --

    So Lick's utility ranked B4 higher than H27? You might want to drop him an e-mail. Just off the top of my head, the utility may have given extra credit for matching all the bases in the 9 base pair deletion (which should really count as one event), but the mismatches should have decreased the "score."

    Leave a comment:


  • DMK
    replied
    Originally posted by GST View Post
    Other people have complained - hopefully they correct this soon.

    The problem seems to be that 8281-8289d is the defining mutation for haplogroup B, however, this deletion is common and occurs in many other people, including a subgroup of people in H27. There seems to be a bug in the FTDNA haplogroup assignment algorithm that incorrectly reassigned these people from H27 to B4'5. If anyone wants to confirm their mtDNA sublclade they can upload their results to James Lick's mthap webtool.
    GST,Thank you for your reply.I Check My mtDNA with James Lick's mthap utility & this is what I got but not sure what it tells me as I am not very good at this.

    Defining Markers for haplogroup B4:
    HVR2: 73G 263G
    CR: 750G 1438G 2706G 4769G 7028T 8281- 8282- 8283- 8284- 8285- 8286- 8287- 8288- 8289- 8860G 11719A 14766T 15326G
    HVR1: 16189C 16217C

    Marker path from rCRS to haplogroup B4 (plus extra markers):
    H2a2a1(rCRS) ⇨ 263G ⇨ H2a2a ⇨ 8860G 15326G ⇨ H2a2 ⇨ 750G ⇨ H2a ⇨ 4769G ⇨ H2 ⇨ 1438G ⇨ H ⇨ 2706G 7028T ⇨ HV ⇨ 14766T ⇨ R0 ⇨ 73G 11719A ⇨ R ⇨ 16189C ⇨ R(T16189C) ⇨ 8281- 8282- 8283- 8284- 8285- 8286- 8287- 8288- 8289- ⇨ B ⇨ 16217C ⇨ B4 ⇨ (315.1C) 2141C 7624C 16129A 16316G (16519C)

    Imperfect Match. Your results contained differences with this haplogroup:
    Matches(16): 263G 750G 1438G 4769G 8281- 8282- 8283- 8284- 8285- 8286- 8287- 8288- 8289- 8860G 11719A 15326G
    Mismatches(6): 73A 2706A 7028C 14766C 16189T 16217T
    Extras(4): (315.1C) 2141C 7624C 16129A 16316G (16519C)

    3) H27

    Defining Markers for haplogroup H27:
    HVR2: 263G
    CR: 750G 1438G 4769G 8860G 11719A 15326G
    HVR1: 16129A 16316G

    Marker path from rCRS to haplogroup H27 (plus extra markers):
    H2a2a1(rCRS) ⇨ 263G ⇨ H2a2a ⇨ 8860G 15326G ⇨ H2a2 ⇨ 750G ⇨ H2a ⇨ 4769G ⇨ H2 ⇨ 1438G ⇨ H ⇨ 16129A ⇨ H(G16129A) ⇨ 11719A 16316G ⇨ H27 ⇨ (315.1C) 2141C 7624C 8281- 8282- 8283- 8284- 8285- 8286- 8287- 8288- 8289- (16519C)

    Good Match! Your results also had extra markers for this haplogroup:
    Matches(9): 263G 750G 1438G 4769G 8860G 11719A 15326G 16129A 16316G
    Extras(11): (315.1C) 2141C 7624C 8281- 8282- 8283- 8284- 8285- 8286- 8287- 8288- 8289- (16519C)

    Leave a comment:


  • GST
    replied
    Originally posted by DMK View Post
    My mtDNA HAPLOGROUP changed from H27 t0 B4'5 and so did all my matches in mtDNA over 2 months ago.I have been waiting to hear from help desk for six weeks since I last got an email from them. Here is the reply I got back from the Darren Marin at the help desk on 7/25/2014 2 questions for FF Has none of my matches complained and how long is it going to take them to fix it.
    Other people have complained - hopefully they correct this soon.

    The problem seems to be that 8281-8289d is the defining mutation for haplogroup B, however, this deletion is common and occurs in many other people, including a subgroup of people in H27. There seems to be a bug in the FTDNA haplogroup assignment algorithm that incorrectly reassigned these people from H27 to B4'5. If anyone wants to confirm their mtDNA sublclade they can upload their results to James Lick's mthap webtool.

    Leave a comment:


  • DMK
    started a topic mtDNA HAPLOGROUP changed from H27 t0 B4'5

    mtDNA HAPLOGROUP changed from H27 t0 B4'5

    My mtDNA HAPLOGROUP changed from H27 t0 B4'5 and so did all my matches in mtDNA over 2 months ago.I have been waiting to hear from help desk for six weeks since I last got an email from them. Here is the reply I got back from the Darren Marin at the help desk on 7/25/2014 2 questions for FF Has none of my matches complained and how long is it going to take them to fix it.

    Quote:Thank you for your email and I apologize for the delay in my reply. I am looking into this with my manager and the lab. I will let you know what I hear.Quote:

    Best Regards,

    Darren Marin Quote:
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